2220 (Tp_HSF_2.4e) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2220 chr_2 (Tp_HSF_2.4e) regulator [Rayko] 474474 475602 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7448662 Thaps2220.2, Thaps2220.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0488

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0083
 0.43

Most Highly Correlated Transcripts

bd738

(bd738) NA
0.892

bd1801

(bd1801) NA
0.8915

4108

hypothetical protein
0.8565

13308

PLN02948
0.8521

1477

hypothetical protein
0.8437

32064

Mito_carr
0.839

267979

HCO3_cotransp superfamily
0.839

bd827

(bd827) NA
0.8359

268443

SAICAR_synt_Sc
0.8227

270004

hypothetical protein
0.8201

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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