22520 RecN
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22520 chr_5 RecN 78062 80784 - RecN

Synonyms

NCBI ID Ensembl Genomes exon ID
7448444 Thaps22520.1, Thaps22520.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0362

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0105
 0.42

Most Highly Correlated Transcripts

1644

Pkinase
0.9052

34590

nt_trans superfamily
0.8956

268929

PLN02885
0.8876

27813

Hid1 superfamily
0.8843

262719

CHD
0.8823

20615

hypothetical protein
0.8821

1237

Seipin superfamily
0.8801

5337

hypothetical protein
0.8708

5291

hypothetical protein
0.8641

21893

CysPc
0.8631

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 105.747 5.28E-25 609 - 785 superfamily 266551
RecN ATPase involved in DNA repair [DNA replication, recombination, and repair] - 198.593 7.09E-55 115 - 803 multi-dom 223571

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47186 PHATRDRAFT_47186 200468 186257 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006364 -

GO:0006364

rRNA processing

Details: 
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
GO Category: 
BP

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