22642 SET
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22642 chr_5 SET 637403 639186 + SET

Synonyms

NCBI ID Ensembl Genomes exon ID
7451787 Thaps22642.1, Thaps22642.3, Thaps22642.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0093

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0099
 0.44

Most Highly Correlated Transcripts

bd1078

(bd1078) NA
0.898

bd1214

(bd1214) KISc_C_terminal
0.891

bd529

(bd529) SNF2_N
0.8874

bd890

(bd890) NA
0.8839

23773

hypothetical protein
0.8783

bd1081

(bd1081) NA
0.8757

bd950

(bd950) NA
0.8757

bd439

(bd439) POLBc_alpha
0.8752

10083

hypothetical protein
0.869

bd1983

(bd1983) RecA-like_NTPases superfamily
0.8676

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SET SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be... cl02566 60.5899 2.75E-11 316 - 457 specific 250181
SET superfamily SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be... - 60.5899 2.75E-11 316 - 457 superfamily 261347

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 259068 318414 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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