22880 Fasciclin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22880 chr_5 Fasciclin 1897776 1898813 - Fasciclin

Synonyms

NCBI ID Ensembl Genomes exon ID
7444875 Thaps22880.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0070

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0169
 0.34

Most Highly Correlated Transcripts

bd1863

(bd1863) NA
0.9401

bd1342

(bd1342) psaL
0.9355

bd1820

(bd1820) Fasciclin
0.9354

bd1350

(bd1350) psaF
0.9287

bd1652

(bd1652) ABC_ATPase superfamily
0.9267

bd1403

(bd1403) NA
0.9186

bd1387

(bd1387) psbE
0.9179

bd1306

(bd1306) NA
0.9173

bd1037

(bd1037) Ycf66_N
0.9159

261400

NA
0.9136

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fasciclin Fasciclin domain; This extracellular domain is found repeated four times in grasshopper fasciclin I... cl02663 68.8228 3.03E-15 88 - 218 specific 251315
Fasciclin superfamily Fasciclin domain; This extracellular domain is found repeated four times in grasshopper fasciclin I... - 68.8228 3.03E-15 88 - 218 superfamily 261399

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_43857 PHATR_43857 245641 120697 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0007155 -

GO:0007155

cell adhesion

Details: 
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
GO Category: 
BP

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