bd1037 (bd1037) Ycf66_NThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1037	bd_26x41	(bd1037) Ycf66_N	57483	57794	+	Ycf66_N

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0058

Most Highly Correlated Transcripts

ThpsCp006 (ycf66) hypothetical protein 1	bd1342 (bd1342) psaL 0.9718	ThpsCp068 (psaL) photosystem I subunit XI 0.9718	264714 Chloroa_b-bind superfamily 0.9705	bd2088 (bd2088) rbcL 0.9672	ThpsCp001 (psaA) photosystem I P700 chlorophyll a apoprotein A1 0.9653
bd1403 (bd1403) NA 0.9639	ThpsCp071 (ycf41) hypothetical protein 0.9639	ThpsCp051 (psbK) photosystem II protein K 0.9612	bd1387 (bd1387) psbE 0.9589

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ycf66_N superfamily		Ycf66 protein N-terminus; This family represents the N-terminus (approximately 80 residues) of...	-	124.69	5.25E-38	2 - 85	superfamily	116065
Ycf66_N superfamily		Ycf66 protein N-terminus; This family represents the N-terminus (approximately 80 residues) of...	-	124.69	5.25E-38	2 - 85	superfamily	116065

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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