22989 (Tp_Myb1R_SHAQKYF9a) MYB DNA binding protein/ transcription factor-like protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22989 chr_6 (Tp_Myb1R_SHAQKYF9a) MYB DNA binding protein/ transcription factor-like protein 371252 373587 + MYB DNA binding protein/ transcription factor-like protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7451146 Thaps22989.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0364

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

2791

DUF1649 superfamily
0.8924

12836

EEP superfamily
0.8684

10581

Peptidase_C54 superfamily
0.8682

3163

SET
0.8431

2525

MCD superfamily
0.8369

bd923

(bd923) NA
0.8326

4403

hypothetical protein
0.8269

8762

SNF2_N
0.8253

8344

hypothetical protein
0.8234

20831

hypothetical protein
0.8188

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

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