2525 MCD superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2525 chr_2 MCD superfamily 1204715 1206407 - MCD superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444674 Thaps2525.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0364

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0138
 0.36

Most Highly Correlated Transcripts

262515

CLN3 superfamily
0.9032

4482

hypothetical protein
0.8906

14315

FAD_binding_7
0.8824

10379

hypothetical protein
0.8788

8510

hypothetical protein
0.8765

261158

calcium channel
0.8747

34590

nt_trans superfamily
0.8739

24685

Glyco_tranf_GTA_type superfamily
0.8723

20633

Aa_trans superfamily
0.871

21778

hypothetical protein
0.8709

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MCD superfamily Malonyl-CoA decarboxylase (MCD); This family consists of several eukaryotic malonyl-CoA... - 233.402 8.41E-71 149 - 535 superfamily 253136

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10799 PHATRDRAFT_10799 140481 259187 Not available Cre02.g145200.t1.1 AT4G04320.2 494061

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0006633 GO:0050080 -

GO:0006633

fatty acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO Category: 
BP

GO:0050080

malonyl-CoA decarboxylase activity

Details: 
Catalysis of the reaction: malonyl-CoA = acetyl-CoA + CO2.
GO Category: 
MF

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