23464 EAP30
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23464 chr_7 EAP30 933675 935559 - EAP30

Synonyms

NCBI ID Ensembl Genomes exon ID
7444117 Thaps23464.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0162

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0021
 0.47

Most Highly Correlated Transcripts

36669

TPT
0.8799

33353

TRX_family
0.8523

9109

hypothetical protein
0.8402

937

Methyltransf_21 superfamily
0.8371

38576

PLN03227
0.8292

10681

hypothetical protein
0.8193

4465

hypothetical protein
0.8184

22150

PPX1
0.8178

5958

hypothetical protein
0.817

268908

Trans_IPPS_HH
0.8169

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EAP30 superfamily EAP30/Vps36 family; This family includes EAP30 as well as the Vps36 protein. Vps36 is involved in... - 138.558 5.34E-38 197 - 461 superfamily 252418
EAP30 superfamily EAP30/Vps36 family; This family includes EAP30 as well as the Vps36 protein. Vps36 is involved in... - 138.558 5.34E-38 197 - 461 superfamily 252418

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44534 PHATRDRAFT_44534 238828 299452 Not available Cre03.g159750.t1.2 AT5G04920.1 294046

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

GO:0016491 -

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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