23598 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23598 chr_7 COG3899 1666128 1670422 - COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7450576 Thaps23598.2, Thaps23598.3, Thaps23598.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0397

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0073
 0.47

Most Highly Correlated Transcripts

25125

hypothetical protein
0.8892

23754

hypothetical protein
0.8847

24492

Lipase_3
0.8813

8733

hypothetical protein
0.8797

20869

hypothetical protein
0.8755

20907

hypothetical protein
0.8753

24305

Ubox
0.8752

262157

E1_like_apg7
0.8749

1551

hypothetical protein
0.8745

21092

hypothetical protein
0.8738

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 93.6813 1.78E-21 364 - 554 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 93.6813 1.78E-21 364 - 554 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 226.125 3.21E-61 363 - 1235 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
35816 Not available 266589 225158 365287 Cre07.g354200.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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