24355 EEP superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24355 chr_11a EEP superfamily 541994 544292 - EEP superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443322 Thaps24355.2, Thaps24355.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0322

Most Highly Correlated Transcripts

25451

AAA superfamily
0.9073

263599

COG3899
0.9033

1216

hypothetical protein
0.903

7261

hypothetical protein
0.8978

12836

EEP superfamily
0.8956

4862

Bromodomain superfamily
0.8922

263610

COG3899
0.8905

22688

hypothetical protein
0.8885

8762

SNF2_N
0.8869

24063

COG3899
0.8837

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EEP superfamily Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the... - 117.033 4.70E-29 22 - 430 superfamily 260458

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43711 PHATRDRAFT_43711 227764 213485 121151 Cre07.g350550.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003906 -

GO:0003906

DNA-(apurinic or apyrimidinic site) lyase activity

Details: 
Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate.
GO Category: 
MF

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