24358 RAP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24358 chr_11a RAP 566598 569825 - RAP

Synonyms

NCBI ID Ensembl Genomes exon ID
7448345 Thaps24358.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0110
 0.24

Most Highly Correlated Transcripts

25129

hypothetical protein
0.9256

23900

hypothetical protein
0.9222

bd96

(bd96) eIF-3_zeta
0.9218

268688

hypothetical protein
0.9158

262722

DEXDc superfamily
0.9099

268735

(GPB1) WD40
0.9099

32374

TPR
0.9073

bd1876

(bd1876) NatB_MDM20 superfamily
0.905

24015

Urb2 superfamily
0.905

268252

Utp21 superfamily
0.9049

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RAP RAP domain; This domain is found in various eukaryotic species, where it is found in proteins that... cl17746 61.4343 1.66E-11 1009 - 1065 specific 254762
RAP superfamily RAP domain; This domain is found in various eukaryotic species, where it is found in proteins that... - 61.4343 1.66E-11 1009 - 1065 superfamily 266808

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 197070 Cre11.g467649.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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