24598 Peptidase_C19
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
24598 chr_13 Peptidase_C19 154893 158294 + Peptidase_C19
NCBI ID Ensembl Genomes exon ID
7452977 Thaps24598.2, Thaps24598.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0242
Normalized Mean Residue
Thaps_bicluster_0286
0.31
hypothetical protein
0.9005
P-ATPase-V
0.9003
(TopoII_2) PLN03128
0.892
AAA_12
0.8857
hypothetical protein
0.8785
hypothetical protein
0.8753
SAC3_GANP
0.8705
COG1204
0.8682
WD40 superfamily
0.8676
hypothetical protein
0.8669
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C19 Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... cl02553 70.5898 1.92E-13 904 - 1036 specific 239072
Peptidase_C19 superfamily Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... - 70.5898 1.92E-13 904 - 1036 superfamily 261337
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004197 GO:0004221 GO:0006511 GO:0003917 -

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

ubiquitin thiolesterase activity

Details: 
Catalysis of the reaction: ubiquitin C-terminal thioester + H2O = ubiquitin + a thiol.
GO Category: 
MF

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

DNA topoisomerase type I activity

Details: 
Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.
GO Category: 
MF
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