3959 KPHMT-like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3959 chr_3 KPHMT-like 2230680 2232214 - KPHMT-like

Synonyms

NCBI ID Ensembl Genomes exon ID
7443807 Thaps3959.1, Thaps3959.2, Thaps3959.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0239

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9235

5105

hypothetical protein
0.9206

32216

(RT5) rpsE_bact
0.9199

10895

PLN02852
0.9186

37497

cysE
0.9171

24619

2-Hacid_dh_1
0.9154

36007

Aldolase_II superfamily
0.9147

264598

AAA
0.9067

19826

LSm1
0.9037

23102

TCP1_epsilon
0.9033

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KPHMT-like Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis... cl00435 385.619 1.41E-132 139 - 400 specific 119342
ICL_KPHMT superfamily Members of the ICL/PEPM_KPHMT enzyme superfamily catalyze the formation and cleavage of either P-C... - 385.619 1.41E-132 139 - 400 superfamily 260420

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8765 PHATRDRAFT_8765 227359 309582 Not available Cre12.g508550.t1.1 AT2G46110.1 548747

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003864 GO:0015940 -

GO:0003864

3-methyl-2-oxobutanoate hydroxymethyltransferase activity

Details: 
Catalysis of the reaction: 5,10-methylenetetrahydrofolate + 3-methyl-2-oxobutanoate = tetrahydrofolate + 2-dehydropantoate.
GO Category: 
MF

GO:0015940

pantothenate biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.
GO Category: 
BP

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