24628 CoAseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24628	chr_13	CoAse	322577	324909	-	CoAse

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445733	Thaps24628.7, Thaps24628.6, Thaps24628.3, Thaps24628.5, Thaps24628.1, Thaps24628.4, Thaps24628.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0401

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0050	0.45

Most Highly Correlated Transcripts

bd1840 (bd1840) NA 0.9111	bd1835 (bd1835) NA 0.8886	10379 hypothetical protein 0.8736	262236 2A0303 0.8716	bd877 (bd877) NA 0.8644	25261 hypothetical protein 0.8593
bd1841 (bd1841) CAP10 superfamily 0.8593	bd1756 (bd1756) NA 0.8532	13308 PLN02948 0.8491	13448 Sec1 0.8425

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CoAse		Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to...	cl00447	155.763	1.58E-44	381 - 536	specific	239518
Nudix_Hydrolase superfamily		Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes...	-	155.763	1.58E-44	381 - 536	superfamily	260427

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_49679	PHATRDRAFT_49679	207231	298567	Not available	Not available	Not available	515572

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments