24902 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24902 chr_14 hypothetical protein 767718 770407 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7452731 Thaps24902.3, Thaps24902.2, Thaps24902.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0164

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0049
 0.45

Most Highly Correlated Transcripts

22837

hypothetical protein
0.8589

25509

hypothetical protein
0.8325

9907

hypothetical protein
0.8315

11300

hypothetical protein
0.8307

1986

MATE_like superfamily
0.8284

1311

ENTH_epsin
0.8271

8415

P4Hc
0.8265

5604

hypothetical protein
0.8248

1943

(Tp_HSF_2.6e) HSF_DNA-bind superfamily
0.8243

3408

FANCL_C superfamily
0.8209

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49801 PHATRDRAFT_49801 192595 321162 114699 Cre04.g217922.t1.1 AT3G16090.1 454953

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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