24925 3a01204
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24925 chr_14 3a01204 857728 860377 + 3a01204

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0472

Most Highly Correlated Transcripts

12899

AAA
0.9016

267979

HCO3_cotransp superfamily
0.8985

40200

TRX_reduct
0.8892

10487

hypothetical protein
0.8882

6167

Cullin
0.8791

16114

PLN02350
0.8732

264653

COG3899
0.8711

9503

PTZ00121
0.8693

268443

SAICAR_synt_Sc
0.8669

21869

hypothetical protein
0.8632

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 109.668 6.76E-27 112 - 355 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 98.0986 4.21E-23 463 - 669 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 98.0986 4.21E-23 463 - 669 superfamily 266576
3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein; [Transport and binding proteins, Other]. - 165.99 7.67E-44 116 - 706 multi-dom 233207

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 182233 Not available Not available Not available Not available 509624

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0016887 GO:0000166 GO:0017111 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

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