25050 ArfGap
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25050 chr_15 ArfGap 705836 707865 - ArfGap

Synonyms

NCBI ID Ensembl Genomes exon ID
7443962 Thaps25050.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0435

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0013
 0.47

Most Highly Correlated Transcripts

bd643

(bd643) NA
0.9066

25944

p450 superfamily
0.8812

bd690

(bd690) NA
0.8571

bd877

(bd877) NA
0.8518

bd1934

(bd1934) NA
0.8504

bd1840

(bd1840) NA
0.8502

6534

DER1
0.8431

23973

BT1
0.8419

269188

(DIC1) cytoplasmic dynein intermediate chain-like protein
0.836

bd1813

(bd1813) NA
0.8271

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArfGap Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (... cl02464 107.707 1.20E-27 15 - 143 specific 250600
ArfGap superfamily Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (... - 107.707 1.20E-27 15 - 143 superfamily 261296
Abhydrolase_5 Alpha/beta hydrolase family; This family contains a diverse range of alpha/beta hydrolase enzymes. - 88.1579 2.42E-20 362 - 560 multi-dom 257229

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49795 PHATRDRAFT_49795 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0043087 -

GO:0043087

regulation of GTPase activity

Details: 
Any process that modulates the rate of GTP hydrolysis by a GTPase.
GO Category: 
BP

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