25111 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25111 chr_16a HA 131335 134310 + HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7442492 Thaps25111.1, Thaps25111.4, Thaps25111.2, Thaps25111.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0401

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0001
 0.47

Most Highly Correlated Transcripts

5604

hypothetical protein
0.9019

10934

Adenylation_DNA_ligase_like superfamily
0.8889

32366

Pumilio
0.8798

27813

Hid1 superfamily
0.8744

264546

HA
0.8709

25451

AAA superfamily
0.8695

12899

AAA
0.8678

20824

hypothetical protein
0.8656

5519

hypothetical protein
0.8638

8269

(Tp_CXC1) regulator [Rayko]
0.8628

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 63.4785 2.34E-12 744 - 805 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 63.4785 2.34E-12 744 - 805 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 63.4785 2.34E-12 744 - 805 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 63.4785 2.34E-12 744 - 805 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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