25639 APH_ChoK_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25639 chr_20 APH_ChoK_like superfamily 449261 451331 - APH_ChoK_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448545 Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0222

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0191
 0.44

Most Highly Correlated Transcripts

bd1877

(bd1877) NA
0.8807

23737

tRNA_m1G_MT superfamily
0.8593

4372

hypothetical protein
0.8515

21929

COG0116
0.8442

263801

RluA
0.841

bd1667

(bd1667) Mpp10
0.8407

260959

SrmB
0.8403

268300

DUF493
0.8388

29782

(eIF6) IF6
0.8387

38361

HMGB-UBF_HMG-box
0.8382

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
APH_ChoK_like superfamily Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK... - 182.501 1.13E-52 113 - 474 superfamily 266599
PLN02236 choline kinase - 122.46 3.85E-31 105 - 524 multi-dom 177880

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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