25725 TatA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25725 chr_22 TatA 439306 441834 + TatA

Synonyms

NCBI ID Ensembl Genomes exon ID
7443871 Thaps25725.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0229
 0.40

Most Highly Correlated Transcripts

17145

WBS_methylT
0.9014

268598

COG1094
0.8999

6835

DUF947
0.8969

262275

hypothetical protein
0.896

22334

hypothetical protein
0.8951

262041

MIF4G
0.8902

29705

18S_RNA_Rcl1p
0.8894

34176

AdoMet_MTases superfamily
0.887

39540

Alpha_ANH_like_II
0.8843

262018

hypothetical protein
0.8837

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TatA Sec-independent protein secretion pathway components [Intracellular trafficking and secretion] cl00788 57.7799 1.19E-11 130 - 210 specific 224739
MttA_Hcf106 superfamily mttA/Hcf106 family; Members of this protein family are involved in a sec independent translocation... - 57.7799 1.19E-11 130 - 210 superfamily 260623

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 305643 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008565 GO:0015031 -

GO:0008565

protein transporter activity

Details: 
Enables the directed movement of proteins into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

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