260748 AdoMet_MTases superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260748 chr_1 AdoMet_MTases superfamily 94366 96727 + AdoMet_MTases superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449020 Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0179
 0.28

Most Highly Correlated Transcripts

5540

hypothetical protein
0.9123

42821

PRK14333
0.9071

22356

PseudoU_synth_ScPUS7
0.9001

25604

hypothetical protein
0.8985

25473

SpoU_methylase
0.8984

5794

hypothetical protein
0.8959

31516

SIK1
0.8941

26492

PRK05385
0.8931

3858

PTZ00141
0.8925

bd763

(bd763) NA
0.8921

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 327.413 1.44E-105 121 - 576 superfamily 266528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23472 PHATRDRAFT_23472 137910 318536 51353 Cre10.g422000.t1.2 AT3G02320.1 488933

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008757 GO:0003723 GO:0004809 GO:0008033 -

GO:0008757

S-adenosylmethionine-dependent methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
GO Category: 
MF

GO:0003723

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

GO:0004809

tRNA (guanine-N2-)-methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing guanine = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine.
GO Category: 
MF

GO:0008033

tRNA processing

Details: 
The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
GO Category: 
BP

Add comment

Log in to post comments