260789 MMT1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260789 chr_1 MMT1 433077 434729 + MMT1

Synonyms

NCBI ID Ensembl Genomes exon ID
7449726 Thaps260789.1, Thaps260789.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0240
 0.25

Most Highly Correlated Transcripts

bd218

(bd218) Chloroa_b-bind superfamily
0.936

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9298

bd1820

(bd1820) Fasciclin
0.9293

bd1765

(bd1765) NA
0.9214

38306

Chloroa_b-bind
0.9177

25933

tpt
0.9166

14192

PLN02449
0.9136

bd1645

(bd1645) tpt
0.9056

3621

hypothetical protein
0.9032

bd1387

(bd1387) psbE
0.9023

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MMT1 cl00316 218.277 132 - 410 specific 260789
Cation_efflux superfamily - 218.277 132 - 410 superfamily 260348

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45119 PHATRDRAFT_45119 197703 290477 461752 Not available AT2G47830.1 308518

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006812 GO:0008324 GO:0016020 -

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008324

cation transmembrane transporter activity

Details: 
Catalysis of the transfer of cation from one side of the membrane to the other.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

Add comment

Log in to post comments