261161 AdoMet_MTases superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261161 chr_1 AdoMet_MTases superfamily 2875333 2876916 - AdoMet_MTases superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452576 Thaps261161.1, Thaps261161.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0321

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0258
 0.30

Most Highly Correlated Transcripts

21085

hypothetical protein
0.846

23576

HA
0.8406

7796

ANK
0.8364

586

PTZ00018
0.8353

31166

AdoMet_dc superfamily
0.8268

19837

AdoMet_MTases superfamily
0.8235

25878

PRK07206
0.8128

38907

Abhydrolase_5
0.8022

2837

hypothetical protein
0.8022

269233

(Tp_HSF_3.4d) HSF_DNA-bind
0.8006

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 183.434 1.99E-53 93 - 305 superfamily 266528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11608 PHATRDRAFT_11608 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008757 GO:0003824 GO:0004766 -

GO:0008757

S-adenosylmethionine-dependent methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
GO Category: 
MF

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0004766

spermidine synthase activity

Details: 
Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine.
GO Category: 
MF

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