7796 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7796	chr_8	ANK	1146524	1148941	+	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444952	Thaps7796.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0321

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0258	0.30	6400000 0.019

Most Highly Correlated Transcripts

4320 hypothetical protein 0.8772	5119 MATE_like superfamily 0.8765	4066 hypothetical protein 0.8711	16372 Aldo_ket_red 0.8587	11101 TauE 0.8499	25878 PRK07206 0.8495
2837 hypothetical protein 0.8402	2010 hypothetical protein 0.8401	261161 AdoMet_MTases superfamily 0.8364	1768 hypothetical protein 0.8358

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	63.5566	8.22E-12	408 - 522	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	63.5566	8.22E-12	408 - 522	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	271218	311026	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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