261181 Gly_transf_sug superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261181	chr_2	Gly_transf_sug superfamily	65407	66134	+	Gly_transf_sug superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445077	Thaps261181.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0410

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0073	0.47	0.000041 8.2

Most Highly Correlated Transcripts

263610 COG3899 0.9068	23754 hypothetical protein 0.8853	4047 hypothetical protein 0.8835	24852 hypothetical protein 0.8826	25600 hypothetical protein 0.8803	263599 COG3899 0.8796
10613 (Tp_HSF_4.2c) HSF_DNA-bind 0.872	22071 Ion_trans 0.871	21852 hypothetical protein 0.8693	bd730 (bd730) NA 0.8653

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Gly_transf_sug superfamily		Glycosyltransferase sugar-binding region containing DXD motif; The DXD motif is a short conserved...	-	70.4335	6.15E-16	166 - 242	superfamily	268305

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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