261453 (Tp_Hox8) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261453 chr_2 (Tp_Hox8) regulator [Rayko] 1501824 1502031 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7446663 Thaps261453.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0261

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0032
 0.47

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9448

24852

hypothetical protein
0.7801

260880

hypothetical protein
0.7764

262692

0.7755

bd1878

(bd1878) NA
0.773

9860

hypothetical protein
0.7722

4312

hypothetical protein
0.7687

3704

PDEase_I
0.766

263610

COG3899
0.7647

9257

COG3899
0.7607

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0003700 GO:0005634 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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