261479 (Tp_E2F-DP1a_SET1a) DP superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261479 chr_2 (Tp_E2F-DP1a_SET1a) DP superfamily 1647166 1648616 + DP superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446689 Thaps261479.3, Thaps261479.4, Thaps261479.1, Thaps261479.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0083

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0013
 0.47

Most Highly Correlated Transcripts

263436

P4Hc
0.911

30701

PRK05279
0.8983

22639

hypothetical protein
0.8831

268257

fabG
0.8788

36007

Aldolase_II superfamily
0.8772

8964

LRR_RI superfamily
0.8727

22554

hypothetical protein
0.8703

11516

hypothetical protein
0.8669

4218

hypothetical protein
0.8659

37523

S_TKc
0.8639

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DP superfamily Transcription factor DP; DP forms a heterodimer with E2F and regulates genes involved in cell cycle... - 104.343 4.07E-27 257 - 353 superfamily 192151
E2F_TDP superfamily E2F/DP family winged-helix DNA-binding domain; This family contains the transcription factor E2F... - 68.3627 8.36E-15 174 - 250 superfamily 251219
E2F_TDP superfamily E2F/DP family winged-helix DNA-binding domain; This family contains the transcription factor E2F... - 68.3627 8.36E-15 174 - 250 superfamily 251219

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_5060 PHATRDRAFT_5060 170071 291867 Not available Cre07.g323000.t1.2 AT5G03415.1 560046

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000074 GO:0003700 GO:0005667 GO:0006355 -

GO:0000074

NA

Details: 
NA
GO Category: 
NA

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005667

transcription factor complex

Details: 
A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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