261548 Peptidase_A22B superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261548 chr_2 Peptidase_A22B superfamily 2092038 2093715 - Peptidase_A22B superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452504 Thaps261548.3, Thaps261548.1, Thaps261548.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0408

Most Highly Correlated Transcripts

bd758

(bd758) NA
0.8862

20654

Reprolysin_3
0.8854

8288

hypothetical protein
0.8828

8130

hypothetical protein
0.875

37123

(VAT2) V-ATPase_V1_A
0.8718

bd1078

(bd1078) NA
0.8712

9491

hypothetical protein
0.8702

6603

hypothetical protein
0.8697

5630

Vps51
0.864

6404

hypothetical protein
0.8601

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_A22B superfamily Signal peptide peptidase; The members of this family are membrane proteins. In some proteins this... - 186.574 1.91E-54 14 - 384 superfamily 260890

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre02.g078858.t1.1 AT1G08700.1 316247

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0007242 GO:0016021 GO:0004190 GO:0009049 GO:0042499 GO:0042500 -

GO:0007242

NA

Details: 
NA
GO Category: 
NA

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0004190

aspartic-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
GO Category: 
MF

GO:0009049

NA

Details: 
NA
GO Category: 
NA

GO:0042499

NA

Details: 
NA
GO Category: 
NA

GO:0042500

aspartic endopeptidase activity, intramembrane cleaving

Details: 
Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain, occurring within the plasma membrane.
GO Category: 
MF

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