5630 Vps51
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5630 chr_5 Vps51 1676693 1679872 + Vps51

Synonyms

NCBI ID Ensembl Genomes exon ID
7445198 Thaps5630.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0409

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9537

5780

hypothetical protein
0.9236

22265

hypothetical protein
0.9234

263599

COG3899
0.9149

8130

hypothetical protein
0.9115

4862

Bromodomain superfamily
0.9095

269532

meiotic check point regulator-like protein
0.9065

5660

hypothetical protein
0.9056

5604

hypothetical protein
0.905

5273

DUF221 superfamily
0.9049

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Vps51 superfamily Vps51/Vps67; This family includes a presumed domain found in a number of components of vesicular... - 66.923 4.35E-13 135 - 221 superfamily 254982
Vps51 superfamily Vps51/Vps67; This family includes a presumed domain found in a number of components of vesicular... - 66.923 4.35E-13 135 - 221 superfamily 254982

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45698 PHATRDRAFT_45698 234677 223392 Not available Cre09.g404650.t1.2 AT4G02030.1 505018

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments