261637 AhpC-TSA_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261637 chr_3 AhpC-TSA_2 152851 153840 - AhpC-TSA_2

Synonyms

NCBI ID Ensembl Genomes exon ID
7452802 Thaps261637.1, Thaps261637.2, Thaps261637.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0094
 0.37

Most Highly Correlated Transcripts

bd1765

(bd1765) NA
0.901

bd894

(bd894) Peptidase_M14_like superfamily
0.8737

bd624

(bd624) Glyco_transf_34 superfamily
0.8635

bd1161

(bd1161) NA
0.8598

bd718

(bd718) PRK10387
0.8596

bd1474

(bd1474) phytoene_desat
0.8476

bd789

(bd789) ABC_ATPase superfamily
0.8391

bd258

(bd258) HU
0.8303

bd1893

(bd1893) NA
0.8295

bd1465

(bd1465) PKc_like superfamily
0.8166

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AhpC-TSA_2 AhpC/TSA antioxidant enzyme; This family contains proteins related to alkyl hydro-peroxide... cl00388 65.018 1.63E-13 94 - 178 specific 258177
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 65.018 1.63E-13 94 - 178 superfamily 260398

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_5617 PHATRDRAFT_5617 160770 246564 56152 Cre17.g697050.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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