262006 alpha_CA_prokaryotic_likeThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262006	chr_4	alpha_CA_prokaryotic_like	89314	90249	-	alpha_CA_prokaryotic_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442032	Thaps262006.2, Thaps262006.1, Thaps262006.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0082

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0143	0.26	750 840

Most Highly Correlated Transcripts

bd1173 (bd1173) S_TKc 0.9755	bd1983 (bd1983) RecA-like_NTPases superfamily 0.9697	bd1081 (bd1081) NA 0.969	1393 (CAP1) Smc 0.9614	bd1214 (bd1214) KISc_C_terminal 0.9591	bd439 (bd439) POLBc_alpha 0.9575
bd950 (bd950) NA 0.9544	7586 MAP65_ASE1 0.9488	10832 hypothetical protein 0.9445	7092 DOMON_DOH 0.9436

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
alpha_CA_prokaryotic_like		Carbonic anhydrase alpha, prokaryotic-like subfamily. Carbonic anhydrases (CAs) are zinc-containing...	cl00012	110.054	2.88E-29	47 - 177	specific	239398
alpha_CA superfamily		Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing...	-	110.054	2.88E-29	47 - 177	superfamily	260137

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	AT4G20990.1	518079

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004089 GO:0006730 GO:0008270 -

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