262116 MATE_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262116 chr_4 MATE_like superfamily 757328 758920 + MATE_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447508 Thaps262116.1, Thaps262116.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0016

Most Highly Correlated Transcripts

270222

0.9831

13393

PLN02321
0.8922

269624

TIM_phosphate_binding superfamily
0.8846

34100

GlcNAc superfamily
0.8845

261400

NA
0.8783

263180

SufS_like
0.8769

35136

NA
0.8738

6028

NA
0.8735

264556

FBPase
0.8718

29850

PLN03132
0.8706

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATE_like superfamily Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins... - 142.315 1.99E-37 86 - 487 superfamily 263758
matE putative efflux protein, MATE family; The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66)... - 85.7591 1.17E-18 94 - 425 multi-dom 233130

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54598 PHATRDRAFT_54598 159003 241772 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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