262975 Peptidase_M8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262975 chr_6 Peptidase_M8 superfamily 1524398 1526047 - Peptidase_M8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442753 Thaps262975.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0292

Most Highly Correlated Transcripts

8503

DUF2431
0.8966

5694

hypothetical protein
0.8728

262303

(Helicase_2) UvrD-helicase
0.8494

33033

YSH1
0.8419

34541

MgtA
0.8397

2666

hypothetical protein
0.8371

262439

Bromodomain superfamily
0.8361

1255

Nic96 superfamily
0.8346

12810

KAP95
0.8307

6768

DUF726 superfamily
0.828

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M8 superfamily Leishmanolysin; Leishmanolysin. - 121.822 7.13E-30 152 - 510 superfamily 267835

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008237 GO:0008270 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

Add comment

Log in to post comments