263053 SEC14Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263053	chr_7	SEC14	104406	104987	-	SEC14

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446591	Thaps263053.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0233

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0291	0.48	30000 2800

Most Highly Correlated Transcripts

267979 HCO3_cotransp superfamily 0.8228	268443 SAICAR_synt_Sc 0.816	38139 Chloroa_b-bind 0.8139	24850 hypothetical protein 0.786	4524 DHQS 0.7847	13308 PLN02948 0.7809
39941 PRK13357 0.7742	13448 Sec1 0.7709	20998 HOOK 0.769	40200 TRX_reduct 0.7683

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SEC14		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	cl15787	71.2622	6.44E-16	29 - 193	specific	238099
SEC14 superfamily		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	-	71.2622	6.44E-16	29 - 193	superfamily	265785

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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