263642 (CDA1) CE4_PuuE_SpCDA1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263642 chr_10 (CDA1) CE4_PuuE_SpCDA1 343112 344551 + CE4_PuuE_SpCDA1

Synonyms

NCBI ID Ensembl Genomes exon ID
7451074 Thaps263642.3, Thaps263642.2, Thaps263642.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0396

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0073
 0.47

Most Highly Correlated Transcripts

24920

hypothetical protein
0.8699

6698

hypothetical protein
0.8656

13448

Sec1
0.8632

1900

hypothetical protein
0.8623

1197

RhaT
0.8584

263930

BioC
0.8568

3043

HA
0.8552

23903

hypothetical protein
0.852

bd1689

(bd1689) NADB_Rossmann superfamily
0.8516

5869

hypothetical protein
0.8418

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CE4_PuuE_SpCDA1 Catalytic domain of bacterial PuuE allantoinases, Schizosaccharomyces pombe chitin deacetylase 1 (... cl15692 486.063 7.45E-174 42 - 318 specific 200599
CE4_SF superfamily Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily; The carbohydrate... - 486.063 7.45E-174 42 - 318 superfamily 265761
uraD_N-term-dom putative urate catabolism protein; This model represents a protein that is predominantly found just... - 463.809 1.34E-164 22 - 323 multi-dom 211797

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40052 PHATRDRAFT_40052 252998 259103 194677 Not available Not available 346147

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005975 GO:0016810 -

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0016810

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Details: 
Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds.
GO Category: 
MF

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