263702 GAT_1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263702 chr_10 GAT_1 superfamily 780335 782076 - GAT_1 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0246

Most Highly Correlated Transcripts

7120

ansA
0.875

23081

NADB_Rossmann superfamily
0.8718

6642

hypothetical protein
0.8716

264621

COG3899
0.8696

25420

hypothetical protein
0.8677

267979

HCO3_cotransp superfamily
0.8674

24218

hypothetical protein
0.8663

21223

hypothetical protein
0.8654

9503

PTZ00121
0.8633

40200

TRX_reduct
0.8622

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GAT_1 superfamily Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1... - 108.487 1.87E-27 289 - 488 superfamily 260141
CbiA CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid a,c-... - 89.0262 1.86E-20 25 - 252 multi-dom 250775

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 215360 320475 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009236 GO:0042242 -

GO:0009236

cobalamin biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
GO Category: 
BP

GO:0042242

cobyrinic acid a,c-diamide synthase activity

Details: 
Catalysis of the conversion of cobyrinic acid to cobyrinic acid a,c-diamide via the intermediate formation of cobyrinic acid c-monoamide.
GO Category: 
MF

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