263742 Synaptobrevin
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
263742 chr_10 Synaptobrevin 1053542 1054166 - Synaptobrevin
NCBI ID Ensembl Genomes exon ID
7449348 Thaps263742.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212
Normalized Mean Residue
Thaps_bicluster_0269
0.41
vATP-synt_E
0.9246
hypothetical protein
0.9183
PTZ00184
0.915
(SDH1) sdhB
0.9076
hypothetical protein
0.9064
FBPase
0.9063
V-ATPase_C superfamily
0.9044
Rab1_Ypt1
0.9024
Rab6
0.901
HMGB-UBF_HMG-box
0.8967
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Synaptobrevin superfamily Synaptobrevin; Synaptobrevin. - 72.572 7.29E-17 103 - 172 superfamily 250253
Synaptobrevin superfamily Synaptobrevin; Synaptobrevin. - 72.572 7.29E-17 103 - 172 superfamily 250253
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16798 PHATRDRAFT_16798 267682 181579 444996 Not available Not available 348837
KEGG description KEGG Pathway
SNARE interactions in vesicular transport map04130
GO:0016021 GO:0016192 -

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

vesicle-mediated transport

Details: 
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO Category: 
BP
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