263953 CYCc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263953 chr_13 CYCc 2749 3481 - CYCc

Synonyms

NCBI ID Ensembl Genomes exon ID
7450810 Thaps263953.1, Thaps263953.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0496

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0011
 0.46

Most Highly Correlated Transcripts

7816

hypothetical protein
0.8667

25048

hypothetical protein
0.8564

264902

(cht1) chitinase
0.8533

261472

WD40 superfamily
0.8421

11315

CAP10 superfamily
0.8397

269257

Peptidases_S8_Subtilisin_subset
0.8319

262025

GH18_chitinase-like superfamily
0.8318

264937

hypothetical protein
0.8299

21655

hypothetical protein
0.828

262004

CAP_ED
0.8263

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CHD cyclase homology domain; Catalytic domains of the mononucleotidyl cyclases (MNC's), also... cl11967 184.32 1.69E-58 35 - 216 specific 143636
Nucleotidyl_cyc_III superfamily Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group... - 184.32 1.69E-58 35 - 216 superfamily 264492
CYCc Adenylyl- / guanylyl cyclase, catalytic domain; Present in two copies in mammalian adenylyl... - 200.176 2.26E-64 2 - 188 multi-dom 214485

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 163025 146425 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Purine metabolism map00230

GO Terms

GO:0007242 GO:0009190 GO:0016849 -

GO:0007242

NA

Details: 
NA
GO Category: 
NA

GO:0009190

cyclic nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.
GO Category: 
BP

GO:0016849

phosphorus-oxygen lyase activity

Details: 
Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.
GO Category: 
MF

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