264129 COG1026
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264129 chr_14 COG1026 238926 243200 + COG1026

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171

Most Highly Correlated Transcripts

bd446

(bd446) HrpA
0.9542

bd624

(bd624) Glyco_transf_34 superfamily
0.9251

bd392

(bd392) DEXDc
0.9081

bd1949

(bd1949) NA
0.9037

bd1192

(bd1192) Acyl_ACP_Desat
0.9017

36372

S_TKc
0.8943

264556

FBPase
0.8939

22138

Sec3_C superfamily
0.8936

8262

hypothetical protein
0.8924

bd1078

(bd1078) NA
0.8922

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
M16C_assoc superfamily Peptidase M16C associated; This domain appears in eukaryotes as well as bacteria and tends to be... - 129.657 4.22E-33 647 - 904 superfamily 116948
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 77.5162 6.85E-16 375 - 565 superfamily 253075
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 77.5162 6.85E-16 375 - 565 superfamily 253075
COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] - 563.884 0 183 - 1136 multi-dom 223957

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 205796 295594 64057 Cre01.g020918.t1.1 AT1G49630.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016020 GO:0004222 GO:0006508 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

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