264377 (PSB7) proteasome_beta_type_7
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
264377 chr_16a (PSB7) proteasome_beta_type_7 363286 364174 + proteasome_beta_type_7
NCBI ID Ensembl Genomes exon ID
7442538 Thaps264377.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0199
Normalized Mean Residue
Thaps_bicluster_0035
0.44
(PSB_3) proteasome_beta_type_4
0.9084
(PSA6) proteasome_alpha_type_6
0.9005
TIM21 superfamily
0.8944
Sec1
0.8817
(RPN8) PLN03246
0.8799
(RPT5) RPT1
0.8784
MECDP_synthase
0.8717
ER_lumen_recept superfamily
0.868
(RPT2) PTZ00361
0.8653
(RPN11) MPN_RPN11_CSN5
0.8638
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
proteasome_beta_type_7 proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the... cl00467 330.313 3.40E-114 53 - 237 specific 239732
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 330.313 3.40E-114 53 - 237 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 170.556 3.17E-51 49 - 255 multi-dom 223711
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_5311 PHATRDRAFT_5311 268646 300236 443432 Cre10.g424400.t1.2 AT3G27430.2 554337
KEGG description KEGG Pathway
Proteasome map03050
GO:0004175 GO:0005839 GO:0006511 GO:0004298 GO:0004299 -

endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
GO Category: 
MF

proteasome core complex

Details: 
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO Category: 
CC

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
Log in to post comments