39157 (RPT2) PTZ00361
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
39157 chr_1 (RPT2) PTZ00361 1708778 1710272 - PTZ00361
NCBI ID Ensembl Genomes exon ID
7442902 Thaps39157.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0199
Normalized Mean Residue
Thaps_bicluster_0098
0.36
(PSB5) proteasome_beta_type_5
0.9258
TIM_phosphate_binding superfamily
0.9208
FeThRed_B
0.9143
MPN_NPL4
0.9126
(PSB_3) proteasome_beta_type_4
0.9067
Mito_carr
0.905
hypothetical protein
0.903
0.9021
PLN02350
0.8988
(RPT5) RPT1
0.8957
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 98.7575 1.36E-24 196 - 362 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 98.7575 1.36E-24 196 - 362 superfamily 267297
PTZ00361 26 proteosome regulatory subunit 4-like protein; Provisional - 749.292 0 32 - 448 multi-dom 185575
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_41778 PHATR_41778 173131 257933 444500 Cre07.g329700.t1.2 AT2G20140.1 354148
KEGG description KEGG Pathway
Proteasome map03050
GO:0000166 GO:0017111 GO:0005524 GO:0005634 GO:0005737 GO:0016787 GO:0030163 GO:0004298 GO:0004299 -

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
GO Category: 
BP

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
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