264646 Glyco_hydro_9 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264646 chr_19c_29 Glyco_hydro_9 superfamily 100453 102578 - Glyco_hydro_9 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0488

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0001
 0.47

Most Highly Correlated Transcripts

270222

0.8423

bd1801

(bd1801) NA
0.7972

bd738

(bd738) NA
0.7965

bd1439

(bd1439) ycf35
0.7884

bd1822

(bd1822) SCP superfamily
0.7836

bd1877

(bd1877) NA
0.7703

bd690

(bd690) NA
0.7569

bd1823

(bd1823) SCP superfamily
0.7522

262153

Glyco_18
0.751

bd735

(bd735) NA
0.7503

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E_set_Cellulase_N N-terminal Early set domain associated with the catalytic domain of cellulase; E or "early... cl09101 91.5397 4.08E-22 1 - 84 specific 199881
E_set superfamily Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or... - 91.5397 4.08E-22 1 - 84 superfamily 263719
Glyco_hydro_9 superfamily Glycosyl hydrolase family 9; Glycosyl hydrolase family 9. - 142.405 3.51E-37 94 - 553 superfamily 261526

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004553 GO:0005975 GO:0008810 -

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

Details: 
Catalysis of the hydrolysis of any O-glycosyl bond.
GO Category: 
MF

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0008810

cellulase activity

Details: 
Catalysis of the endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
GO Category: 
MF

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