264727 REC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264727 chr_20 REC 601163 604438 - REC

Synonyms

NCBI ID Ensembl Genomes exon ID
7443402 Thaps264727.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0267

Most Highly Correlated Transcripts

11371

hypothetical protein
0.9158

262025

GH18_chitinase-like superfamily
0.9098

262797

Sec7
0.9061

12645

MYSc
0.9025

2587

O-FucT_like
0.9002

269843

(ZFP12) hypothetical protein
0.8966

37638

HrpA
0.8962

262617

(Tp_Myb2R7) MYB DNA binding protein/ transcription factor-like protein
0.8957

35129

(Tp_Myb2R9) PLN03142
0.8952

23130

NT_PAP_TUTase
0.8951

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 93.0241 8.28E-22 947 - 1068 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 93.0241 8.28E-22 947 - 1068 superfamily 267431
LRR_RI superfamily Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue... - 91.6481 5.35E-20 305 - 599 superfamily 238064
OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain... - 69.6333 2.56E-13 945 - 1066 multi-dom 223816

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 271220 306550 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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