262617 (Tp_Myb2R7) MYB DNA binding protein/ transcription factor-like protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262617 chr_5 (Tp_Myb2R7) MYB DNA binding protein/ transcription factor-like protein 1835655 1840196 - MYB DNA binding protein/ transcription factor-like protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7445231 Thaps262617.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0268

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0286
 0.31

Most Highly Correlated Transcripts

37638

HrpA
0.9467

11371

hypothetical protein
0.935

264679

Syja_N
0.933

22916

DUF1162 superfamily
0.9311

168

(RPB1) PRK08566
0.9307

262025

GH18_chitinase-like superfamily
0.9293

262797

Sec7
0.9287

12500

SNF2_N
0.9277

2587

O-FucT_like
0.9269

32217

MA3
0.9268

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49808 PHATRDRAFT_49808 154720 146354 459412 Cre06.g264400.t1.1 Not available 553248

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

Add comment

Log in to post comments