264885 TBC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264885 chr_23 TBC 73702 77268 + TBC

Synonyms

NCBI ID Ensembl Genomes exon ID
7448267 Thaps264885.3, Thaps264885.2, Thaps264885.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0489

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0021
 0.47

Most Highly Correlated Transcripts

261357

NAD_binding_8 superfamily
0.8305

11974

Rav1p_C superfamily
0.827

264276

Vps8 superfamily
0.8206

264534

Aa_trans superfamily
0.8205

11613

hypothetical protein
0.815

11938

NADB_Rossmann superfamily
0.8084

25811

hypothetical protein
0.8035

261058

UDP-g_GGTase superfamily
0.8014

263483

CHD
0.7999

260784

sec14-like cytosolic factor
0.7995

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs; Widespread domain present in Gyp6 and Gyp7,... cl02495 71.9541 4.61E-14 494 - 670 specific 214540
RabGAP-TBC superfamily Rab-GTPase-TBC domain; Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are... - 71.9541 4.61E-14 494 - 670 superfamily 261308

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_55114 PHATRDRAFT_55114 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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