268220 Peptidase_M6 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
268220	chr_2	Peptidase_M6 superfamily	617813	619198	+	Peptidase_M6 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448699	Thaps268220.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0459

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0111	0.37	1200 2100

Most Highly Correlated Transcripts

268966 GH18_chitinase-like superfamily 0.8841	8028 hypothetical protein 0.8634	2928 hypothetical protein 0.8172	263096 lysozyme_like superfamily 0.8125	21983 hypothetical protein 0.7791	7815 hypothetical protein 0.7698
262149 Cyt-b5 0.7532	19626 ZnMc superfamily 0.7308	262148 Cyt-b5 0.7289	270222 0.7276

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_M6 superfamily		Immune inhibitor A peptidase M6; The insect pathogenic Gram-positive Bacillus thuringiensis...	-	112.126	3.23E-28	192 - 448	superfamily	245672

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006508 GO:0008237 GO:0008270 -

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