262148 Cyt-b5Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262148	chr_4	Cyt-b5	951866	952737	-	Cyt-b5

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453357	Thaps262148.1, Thaps262148.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0493

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0219	0.41	1.2 7700

Most Highly Correlated Transcripts

262149 Cyt-b5 0.9889	bd1125 (bd1125) LSm4 0.8906	269307 hypothetical protein 0.8668	264577 lysozyme_like superfamily 0.8572	30804 AdoMet_dc 0.8511	263097 GH18_chitinase-like superfamily 0.849
bd1124 (bd1124) LSm4 0.8459	5801 hypothetical protein 0.838	bd911 (bd911) GH18_chitinase-like superfamily 0.8288	8898 hypothetical protein 0.8259

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cyt-b5		Cytochrome b5-like Heme/Steroid binding domain; This family includes heme binding domains from a...	cl02041	60.2895	2.40E-12	185 - 240	specific	249651
Cyt-b5 superfamily		Cytochrome b5-like Heme/Steroid binding domain; This family includes heme binding domains from a...	-	60.2895	2.40E-12	185 - 240	superfamily	261158

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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