268788 (Tp_Myb1R_SHAQKYF3) MYB DNA binding protein/ transcription factor-like protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268788 chr_4 (Tp_Myb1R_SHAQKYF3) MYB DNA binding protein/ transcription factor-like protein 2198604 2200260 + MYB DNA binding protein/ transcription factor-like protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7452244 Thaps268788.1, Thaps268788.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0420

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0029
 0.39

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9351

bd1841

(bd1841) CAP10 superfamily
0.9323

bd1839

(bd1839) NA
0.8997

bd1756

(bd1756) NA
0.8882

bd1941

(bd1941) NA
0.8784

bd410

(bd410) HNHc
0.8715

269141

TPR
0.8655

25393

hypothetical protein
0.845

264439

DadA
0.838

36291

PLN02528
0.8357

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44256 PHATRDRAFT_44256 165255 145145 Not available Cre06.g275350.t1.1 AT1G18330.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

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