268859 (GGTB1) PLN03201
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
268859 chr_5 (GGTB1) PLN03201 572749 574126 - PLN03201
NCBI ID Ensembl Genomes exon ID
7449719 Thaps268859.1, Thaps268859.2, Thaps268859.3
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0242
hypothetical protein
0.9964
SAICAR_synt_Sc
0.9351
EngA2
0.9202
PTZ00340
0.9201
GH99_GH71_like_2
0.9195
HCO3_cotransp superfamily
0.9165
Nitro_FMN_reductase superfamily
0.914
Tim17
0.913
2-Hacid_dh_1
0.9128
TEF1
0.9118
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GGTase-II Geranylgeranyltransferase type II (GGTase-II)_like proteins containing the protein... cl08267 412.046 2.73E-143 18 - 327 specific 239224
ISOPREN_C2_like superfamily This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly... - 412.046 2.73E-143 18 - 327 superfamily 263556
PLN03201 RAB geranylgeranyl transferase beta-subunit; Provisional - 512.706 0 7 - 361 multi-dom 215630
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28577 PHATRDRAFT_28577 159540 4673 62247 Cre01.g053500.t1.1 AT3G12070.2 321725
KEGG description KEGG Pathway
Not available Not available
GO:0003824 GO:0004659 GO:0004660 GO:0004661 GO:0004662 GO:0004663 GO:0008318 GO:0008412 GO:0008495 GO:0046428 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

prenyltransferase activity

Details: 
Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).
GO Category: 
MF

protein farnesyltransferase activity

Details: 
Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.
GO Category: 
MF

protein geranylgeranyltransferase activity

Details: 
Catalysis of the covalent addition of a geranylgeranyl (20-carbon isoprenoid) group via thioether linkages to a cysteine residue at or near the C terminus of a protein.
GO Category: 
MF

CAAX-protein geranylgeranyltransferase activity

Details: 
Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families.
GO Category: 
MF

Rab geranylgeranyltransferase activity

Details: 
Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family.
GO Category: 
MF

protein prenyltransferase activity

Details: 
Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein.
GO Category: 
MF

4-hydroxybenzoate octaprenyltransferase activity

Details: 
Catalysis of the reaction: farnesylfarnesylgeranyl diphosphate + p-hydroxybenzoate = 3-octaprenyl-4-hydroxybenzoate + diphosphate.
GO Category: 
MF

protoheme IX farnesyltransferase activity

Details: 
Catalysis of the reaction: protoheme IX + (2E,6E)-farnesyl diphosphate + H2O = heme o + diphosphate.
GO Category: 
MF

1,4-dihydroxy-2-naphthoate octaprenyltransferase activity

Details: 
Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + polyprenylpyrophosphate = dimethylmenaquinone + diphosphate + CO2.
GO Category: 
MF
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