8073 TauDThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8073	chr_9	TauD	681684	683054	+	TauD

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448076	Thaps8073.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0010

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0163	0.38	0.012 41

Most Highly Correlated Transcripts

268908 Trans_IPPS_HH 0.943	16295 FBPase 0.8977	26991 GRX_GRXh_1_2_like 0.8976	268592 VDE superfamily 0.8936	5415 Thioredoxin_like superfamily 0.8933	3974 (UroD2) URO-D 0.8928
261400 NA 0.8889	268324 60KD_IMP 0.8823	36649 SufE superfamily 0.8819	35771 PCI 0.8793

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TauD		Taurine catabolism dioxygenase TauD, TfdA family; This family consists of taurine catabolism...	cl00184	91.7193	2.92E-21	125 - 414	specific	251459
CAS_like superfamily		Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG)...	-	91.7193	2.92E-21	125 - 414	superfamily	260242

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44770	PHATRDRAFT_44770	170428	249714	440046	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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